IL_9F1B_217
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- AGUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 9F1B|1|B5|G|3571
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_217 not in the Motif Atlas
- Geometric match to IL_5TBW_077
- Geometric discrepancy: 0.1271
- The information below is about IL_5TBW_077
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_06455.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
9F1B|1|B5|A|2693
9F1B|1|B5|G|2694
9F1B|1|B5|U|2695
9F1B|1|B5|C|2696
9F1B|1|B5|G|2697
9F1B|1|B5|G|2698
*
9F1B|1|B5|C|3569
9F1B|1|B5|U|3570
9F1B|1|B5|G|3571
9F1B|1|B5|U|3572
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BB
- Ribosomal protein L3
- Chain BV
- Ribosomal protein L23
Coloring options: