IL_9F1B_228
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- GCU*G(OMG)U
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_228 not in the Motif Atlas
- Geometric match to IL_2ZNI_001
- Geometric discrepancy: 0.1299
- The information below is about IL_2ZNI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
9F1B|1|B5|G|3437
9F1B|1|B5|C|3438
9F1B|1|B5|U|3439
*
9F1B|1|B5|G|3475
9F1B|1|B5|OMG|3476
9F1B|1|B5|U|3477
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain A2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Aa
- 40S ribosomal protein S3a
- Chain BA
- Large ribosomal subunit protein uL2
Coloring options: