IL_9F1B_298
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- CUG*CGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_298 not in the Motif Atlas
- Homologous match to IL_4V9F_105
- Geometric discrepancy: 0.2007
- The information below is about IL_4V9F_105
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
9F1B|1|B7|C|68
9F1B|1|B7|U|69
9F1B|1|B7|G|70
*
9F1B|1|B7|C|105
9F1B|1|B7|G|106
9F1B|1|B7|G|107
Current chains
- Chain B7
- 5S rRNA
Nearby chains
- Chain B
- Large ribosomal subunit protein uL18
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BI
- 60S ribosomal protein L10
- Chain BS
- Large ribosomal subunit protein eL20
- Chain BT
- 60S ribosomal protein L21
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