IL_9F1B_308
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- GGAUAAC*GCUAA(OMU)A(OMC)
- Length
- 15 nucleotides
- Bulged bases
- 9F1B|1|A2|OMU|172
- QA status
- Modified nucleotides: OMU, OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_308 not in the Motif Atlas
- Homologous match to IL_8C3A_402
- Geometric discrepancy: 0.1029
- The information below is about IL_8C3A_402
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.4
- Basepair signature
- cWW-L-R-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
9F1B|1|A2|G|145
9F1B|1|A2|G|146
9F1B|1|A2|A|147
9F1B|1|A2|U|148
9F1B|1|A2|A|149
9F1B|1|A2|A|150
9F1B|1|A2|C|151
*
9F1B|1|A2|G|167
9F1B|1|A2|C|168
9F1B|1|A2|U|169
9F1B|1|A2|A|170
9F1B|1|A2|A|171
9F1B|1|A2|OMU|172
9F1B|1|A2|A|173
9F1B|1|A2|OMC|174
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Af
- 40S ribosomal protein S6
- Chain Ax
- 40S ribosomal protein S24
- Chain BW
- Ribosomal protein L24
Coloring options: