IL_9F1B_314

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

AC*GAA(PSU)

Length

6 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9F1B_314 not in the Motif Atlas

Homologous match to IL_8P9A_412

Geometric discrepancy: 0.1261

The information below is about IL_8P9A_412

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68140.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

18

Unit IDs

9F1B|1|A2|A|803
9F1B|1|A2|C|804
*
9F1B|1|A2|G|861
9F1B|1|A2|A|862
9F1B|1|A2|A|863
9F1B|1|A2|PSU|864

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Ag

40S ribosomal protein S7

Chain Ak

40S ribosomal protein S11

Chain Av

Ribosomal protein S15a

Chain Aw

40S ribosomal protein S23