3D structure

PDB id
9F1B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
Experimental method
ELECTRON MICROSCOPY
Resolution
3.01 Å

Loop

Sequence
CGAAU*AAAUGUG
Length
12 nucleotides
Bulged bases
9F1B|1|B5|G|119, 9F1B|1|B5|U|150
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9F1B|1|B5|C|118
9F1B|1|B5|G|119
9F1B|1|B5|A|120
9F1B|1|B5|A|121
9F1B|1|B5|U|122
*
9F1B|1|B5|A|147
9F1B|1|B5|A|148
9F1B|1|B5|A|149
9F1B|1|B5|U|150
9F1B|1|B5|G|151
9F1B|1|B5|U|152
9F1B|1|B5|G|153

Current chains

Chain B5
28S rRNA

Nearby chains

Chain B8
5.8S ribosomal RNA; 5.8S rRNA
Chain BG
60S ribosomal protein L7a
Chain BN
Ribosomal protein L15
Chain Bh
60S ribosomal protein L35

Coloring options:

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