IL_9F1B_329

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

UCC*GGUCG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9F1B_329 not in the Motif Atlas

Geometric match to IL_7MLW_001

Geometric discrepancy: 0.2698

The information below is about IL_7MLW_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

9F1B|1|B5|U|522
9F1B|1|B5|C|523
9F1B|1|B5|C|524
*
9F1B|1|B5|G|631
9F1B|1|B5|G|632
9F1B|1|B5|U|633
9F1B|1|B5|C|634
9F1B|1|B5|G|635

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BL

Large ribosomal subunit protein eL13