IL_9F1B_357

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1B|1|B5|C|4212
9F1B|1|B5|A|4213
9F1B|1|B5|U|4214
9F1B|1|B5|U|4215
9F1B|1|B5|G|4216
*
9F1B|1|B5|C|4231
9F1B|1|B5|C|4232
9F1B|1|B5|A|4233
9F1B|1|B5|A|4234
9F1B|1|B5|G|4235
9F1B|1|B5|C|4236
9F1B|1|B5|G|4237

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BB

Ribosomal protein L3

Chain BH

60S ribosomal protein L9

Chain BO

Large ribosomal subunit protein uL13

Chain BV

Ribosomal protein L23

Chain Bm

Ubiquitin-ribosomal protein eL40 fusion protein