IL_9F1C_091
3D structure
- PDB id
- 9F1C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.78 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- 9F1C|1|A2|A|1826
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1C_091 not in the Motif Atlas
- Geometric match to IL_5J7L_033
- Geometric discrepancy: 0.3408
- The information below is about IL_5J7L_033
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
9F1C|1|A2|C|1709
9F1C|1|A2|G|1710
9F1C|1|A2|C|1711
9F1C|1|A2|U|1712
*
9F1C|1|A2|A|1823
9F1C|1|A2|A|1824
9F1C|1|A2|A|1825
9F1C|1|A2|A|1826
9F1C|1|A2|G|1827
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AD
- 40S ribosomal protein S30
- Chain AH
- mRNA
- Chain Aw
- 40S ribosomal protein S23
- Chain Az
- 60S ribosomal protein L41
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
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