IL_9F1D_059
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- UGC*GGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1D_059 not in the Motif Atlas
- Geometric match to IL_4E59_001
- Geometric discrepancy: 0.176
- The information below is about IL_4E59_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
9F1D|1|A2|U|1102
9F1D|1|A2|G|1103
9F1D|1|A2|C|1104
*
9F1D|1|A2|G|1130
9F1D|1|A2|G|1131
9F1D|1|A2|G|1132
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AA
- 40S ribosomal protein S27
- Chain AE
- Small ribosomal subunit protein eS26
- Chain Aa
- 40S ribosomal protein S3a
- Chain Am
- 40S ribosomal protein S13
- Chain Aq
- 40S ribosomal protein eS17
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