IL_9F1D_126

3D structure

PDB id

9F1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9F1D|1|B5|U|467, 9F1D|1|B5|U|681

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1D|1|B5|A|466
9F1D|1|B5|U|467
9F1D|1|B5|U|468
9F1D|1|B5|C|469
9F1D|1|B5|A|470
9F1D|1|B5|A|471
9F1D|1|B5|C|472
*
9F1D|1|B5|G|676
9F1D|1|B5|C|677
9F1D|1|B5|G|678
9F1D|1|B5|C|679
9F1D|1|B5|A|680
9F1D|1|B5|U|681
9F1D|1|B5|U|682
9F1D|1|B5|U|683

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BE

60S ribosomal protein L6

Chain Br

60S ribosomal protein L28

Chain DB

N-alpha-acetyltransferase 15, NatA auxiliary subunit