IL_9F1D_303
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- UAA*UCGA
- Length
- 7 nucleotides
- Bulged bases
- 9F1D|1|B8|G|94
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1D_303 not in the Motif Atlas
- Homologous match to IL_5TBW_145
- Geometric discrepancy: 0.2462
- The information below is about IL_5TBW_145
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_54650.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
9F1D|1|B8|U|64
9F1D|1|B8|A|65
9F1D|1|B8|A|66
*
9F1D|1|B8|U|92
9F1D|1|B8|C|93
9F1D|1|B8|G|94
9F1D|1|B8|A|95
Current chains
- Chain B8
- 5.8S rRNA
Nearby chains
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BY
- Ribosomal protein L26
- Chain Bh
- 60S ribosomal protein L35
- Chain Bj
- Ribosomal protein L37
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