IL_9F58_003
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAA*UCGA
- Length
- 7 nucleotides
- Bulged bases
- 9F58|1|4|G|95
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_003 not in the Motif Atlas
- Homologous match to IL_8P9A_371
- Geometric discrepancy: 0.0601
- The information below is about IL_8P9A_371
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_68118.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 27
Unit IDs
9F58|1|4|U|64
9F58|1|4|A|65
9F58|1|4|A|66
*
9F58|1|4|U|93
9F58|1|4|C|94
9F58|1|4|G|95
9F58|1|4|A|96
Current chains
- Chain 4
- 5.8S rRNA
Nearby chains
- Chain J
- 60S ribosomal protein L26-A
- Chain T
- 60S ribosomal protein L35-A
- Chain V
- 60S ribosomal protein L37-A
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: