IL_9F58_019
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAUAAAUC*GGAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 9F58|1|a|A|519, 9F58|1|a|U|520
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_019 not in the Motif Atlas
- Homologous match to IL_8P9A_247
- Geometric discrepancy: 0.0723
- The information below is about IL_8P9A_247
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06606.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
9F58|1|a|G|517
9F58|1|a|G|518
9F58|1|a|A|519
9F58|1|a|U|520
9F58|1|a|A|521
9F58|1|a|A|522
9F58|1|a|A|523
9F58|1|a|U|524
9F58|1|a|C|525
*
9F58|1|a|G|567
9F58|1|a|G|568
9F58|1|a|A|569
9F58|1|a|A|570
9F58|1|a|U|571
9F58|1|a|A|572
9F58|1|a|C|573
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain 3
- 60S ribosomal protein L4-A
- Chain g
- 60S ribosomal protein L7-A
- Chain n
- 60S ribosomal protein L14-A
- Chain t
- 60S ribosomal protein L20-A
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