IL_9F58_021
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUC*GCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_021 not in the Motif Atlas
- Homologous match to IL_8CRE_023
- Geometric discrepancy: 0.0913
- The information below is about IL_8CRE_023
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
9F58|1|a|G|668
9F58|1|a|U|669
9F58|1|a|C|670
*
9F58|1|a|G|792
9F58|1|a|C|793
9F58|1|a|U|794
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain 3
- 60S ribosomal protein L4-A
- Chain L
- 60S ribosomal protein L28
- Chain m
- 60S ribosomal protein L13-A
- Chain r
- 60S ribosomal protein L18-A
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