IL_9F58_030
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_030 not in the Motif Atlas
- Homologous match to IL_8P9A_258
- Geometric discrepancy: 0.0654
- The information below is about IL_8P9A_258
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
9F58|1|a|U|834
9F58|1|a|G|835
9F58|1|a|A|836
9F58|1|a|A|837
9F58|1|a|G|838
*
9F58|1|a|U|855
9F58|1|a|G|856
9F58|1|a|G|857
9F58|1|a|A|858
9F58|1|a|G|859
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain 0
- 60S ribosomal protein L43-A
- Chain c
- 60S ribosomal protein L2-A
- Chain s
- 60S ribosomal protein L19-A
Coloring options: