IL_9F58_062
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGAUGG*CGUUUCAAAGGCCUGAUUUUAUGCAGGCCACCAU
- Length
- 40 nucleotides
- Bulged bases
- 9F58|1|a|C|1556, 9F58|1|a|A|1558, 9F58|1|a|C|1581
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9F58|1|a|A|1537
9F58|1|a|G|1538
9F58|1|a|A|1539
9F58|1|a|U|1540
9F58|1|a|G|1541
9F58|1|a|G|1542
*
9F58|1|a|C|1551
9F58|1|a|G|1552
9F58|1|a|U|1553
9F58|1|a|U|1554
9F58|1|a|U|1555
9F58|1|a|C|1556
9F58|1|a|A|1557
9F58|1|a|A|1558
9F58|1|a|A|1559
9F58|1|a|G|1560
9F58|1|a|G|1561
9F58|1|a|C|1562
9F58|1|a|C|1563
9F58|1|a|U|1564
9F58|1|a|G|1565
9F58|1|a|A|1566
9F58|1|a|U|1567
9F58|1|a|U|1568
9F58|1|a|U|1569
9F58|1|a|U|1570
9F58|1|a|A|1571
9F58|1|a|U|1572
9F58|1|a|G|1573
9F58|1|a|C|1574
9F58|1|a|A|1575
9F58|1|a|G|1576
9F58|1|a|G|1577
9F58|1|a|C|1578
9F58|1|a|C|1579
9F58|1|a|A|1580
9F58|1|a|C|1581
9F58|1|a|C|1582
9F58|1|a|A|1583
9F58|1|a|U|1584
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain P
- Large ribosomal subunit protein eL41B
- Chain V
- 60S ribosomal protein L37-A
- Chain c
- 60S ribosomal protein L2-A
- Chain h
- 60S ribosomal protein L8-A
- Chain o
- 60S ribosomal protein L15-A
- Chain z
- 60S ribosomal protein L25
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