IL_9F58_097
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GG*CAC
- Length
- 5 nucleotides
- Bulged bases
- 9F58|1|a|A|2626
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_097 not in the Motif Atlas
- Homologous match to IL_8P9A_325
- Geometric discrepancy: 0.0498
- The information below is about IL_8P9A_325
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 134
Unit IDs
9F58|1|a|G|2614
9F58|1|a|G|2615
*
9F58|1|a|C|2625
9F58|1|a|A|2626
9F58|1|a|C|2627
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain I
- eIF-2-alpha kinase GCN2
- Chain M
- 60S ribosomal protein L29
- Chain Z
- 60S ribosomal protein L42-A
- Chain j
- 60S ribosomal protein L10
- Chain u
- 60S ribosomal protein L21-A
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