IL_9F58_104
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCAAG*CGACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_104 not in the Motif Atlas
- Homologous match to IL_8CRE_114
- Geometric discrepancy: 0.088
- The information below is about IL_8CRE_114
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
9F58|1|a|U|2835
9F58|1|a|C|2836
9F58|1|a|A|2837
9F58|1|a|A|2838
9F58|1|a|G|2839
*
9F58|1|a|C|2849
9F58|1|a|G|2850
9F58|1|a|A|2851
9F58|1|a|C|2852
9F58|1|a|A|2853
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain Y
- Ubiquitin-60S ribosomal protein L40
- Chain j
- 60S ribosomal protein L10
Coloring options: