IL_9F9S_041

3D structure

PDB id

9F9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast SDD1 Disome with Mbf1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUCCGGG*CUUGAC

Length

14 nucleotides

Bulged bases

9F9S|1|L1|C|1016, 9F9S|1|L1|C|1017

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F9S|1|L1|G|1013
9F9S|1|L1|U|1014
9F9S|1|L1|U|1015
9F9S|1|L1|C|1016
9F9S|1|L1|C|1017
9F9S|1|L1|G|1018
9F9S|1|L1|G|1019
9F9S|1|L1|G|1020
*
9F9S|1|L1|C|1032
9F9S|1|L1|U|1033
9F9S|1|L1|U|1034
9F9S|1|L1|G|1035
9F9S|1|L1|A|1036
9F9S|1|L1|C|1037

Current chains

Chain L1

Saccharomyces cerevisiae S288C 25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LE

60S ribosomal protein L10

Chain LF

60S ribosomal protein L11-A