IL_9F9S_130
3D structure
- PDB id
- 9F9S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast SDD1 Disome with Mbf1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUAAG*CUGAG
- Length
- 11 nucleotides
- Bulged bases
- 9F9S|1|L1|G|3369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F9S_130 not in the Motif Atlas
- Homologous match to IL_8P9A_360
- Geometric discrepancy: 0.0633
- The information below is about IL_8P9A_360
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.1
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
9F9S|1|L1|U|3332
9F9S|1|L1|G|3333
9F9S|1|L1|U|3334
9F9S|1|L1|A|3335
9F9S|1|L1|A|3336
9F9S|1|L1|G|3337
*
9F9S|1|L1|C|3367
9F9S|1|L1|U|3368
9F9S|1|L1|G|3369
9F9S|1|L1|A|3370
9F9S|1|L1|G|3371
Current chains
- Chain L1
- Saccharomyces cerevisiae S288C 25S ribosomal RNA (RDN25-1)
Nearby chains
- Chain Ln
- 60S ribosomal protein L31-A
- Chain Lu
- 60S ribosomal protein L24-A
- Chain Lx
- 60S ribosomal protein L3
Coloring options: