IL_9F9S_145
3D structure
- PDB id
- 9F9S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast SDD1 Disome with Mbf1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AUC*GU
- Length
- 5 nucleotides
- Bulged bases
- 9F9S|1|M1|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F9S_145 not in the Motif Atlas
- Homologous match to IL_8P9A_232
- Geometric discrepancy: 0.0805
- The information below is about IL_8P9A_232
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 147
Unit IDs
9F9S|1|M1|A|13
9F9S|1|M1|U|14
9F9S|1|M1|C|15
*
9F9S|1|M2|G|144
9F9S|1|M2|U|145
Current chains
- Chain M1
- Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1) with modifications
- Chain M2
- Saccharomyces cerevisiae S288C 5.8S ribosomal RNA
Nearby chains
- Chain MC
- 60S ribosomal protein L8-A
- Chain MI
- 60S ribosomal protein L15-A
- Chain Mt
- 60S ribosomal protein L25
Coloring options: