IL_9F9S_296
3D structure
- PDB id
- 9F9S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast SDD1 Disome with Mbf1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCUAAG*CUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F9S_296 not in the Motif Atlas
- Homologous match to IL_8P9A_378
- Geometric discrepancy: 0.1514
- The information below is about IL_8P9A_378
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61299.6
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
9F9S|1|R1|U|58
9F9S|1|R1|C|59
9F9S|1|R1|U|60
9F9S|1|R1|A|61
9F9S|1|R1|A|62
9F9S|1|R1|G|63
*
9F9S|1|R1|C|87
9F9S|1|R1|U|88
9F9S|1|R1|G|89
Current chains
- Chain R1
- Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1)
Nearby chains
- Chain Re
- 40S ribosomal protein S4-A
- Chain Rg
- 40S ribosomal protein S6-A
- Chain Ry
- 40S ribosomal protein S24-A
Coloring options: