IL_9F9S_327

3D structure

PDB id

9F9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast SDD1 Disome with Mbf1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGCCGGU*GAUUUCC

Length

14 nucleotides

Bulged bases

9F9S|1|R1|C|682

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F9S|1|R1|G|651
9F9S|1|R1|G|652
9F9S|1|R1|C|653
9F9S|1|R1|C|654
9F9S|1|R1|G|655
9F9S|1|R1|G|656
9F9S|1|R1|U|657
*
9F9S|1|R1|G|677
9F9S|1|R1|A|678
9F9S|1|R1|U|679
9F9S|1|R1|U|680
9F9S|1|R1|U|681
9F9S|1|R1|C|682
9F9S|1|R1|C|683

Current chains

Chain R1

Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1)

Nearby chains

Chain Rh

40S ribosomal protein S7-A