IL_9F9S_337

3D structure

PDB id

9F9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast SDD1 Disome with Mbf1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGUAU*AGACU

Length

10 nucleotides

Bulged bases

9F9S|1|R1|U|886, 9F9S|1|R1|A|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F9S|1|R1|A|884
9F9S|1|R1|G|885
9F9S|1|R1|U|886
9F9S|1|R1|A|887
9F9S|1|R1|U|888
*
9F9S|1|R1|A|924
9F9S|1|R1|G|925
9F9S|1|R1|A|926
9F9S|1|R1|C|927
9F9S|1|R1|U|928

Current chains

Chain R1

Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1)

Nearby chains

Chain Mb

60S ribosomal protein L43-A

Chain Mw

60S ribosomal protein L2-A

Chain RA

Small ribosomal subunit protein eS26A

Chain Rb

40S ribosomal protein S1-A

Chain Ro

40S ribosomal protein S14-B