IL_9F9S_385
3D structure
- PDB id
- 9F9S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast SDD1 Disome with Mbf1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 9F9S|1|S1|U|66, 9F9S|1|S1|A|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F9S_385 not in the Motif Atlas
- Homologous match to IL_8C3A_398
- Geometric discrepancy: 0.1432
- The information below is about IL_8C3A_398
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34063.1
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9F9S|1|S1|U|64
9F9S|1|S1|A|65
9F9S|1|S1|U|66
9F9S|1|S1|A|67
9F9S|1|S1|A|68
9F9S|1|S1|G|69
*
9F9S|1|S1|U|82
9F9S|1|S1|G|83
9F9S|1|S1|A|84
9F9S|1|S1|A|85
9F9S|1|S1|A|86
Current chains
- Chain S1
- Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1)
Nearby chains
- Chain Lu
- 60S ribosomal protein L24-A
- Chain Sg
- 40S ribosomal protein S6-A
- Chain Sy
- 40S ribosomal protein S24-A
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