IL_9F9S_419

3D structure

PDB id

9F9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast SDD1 Disome with Mbf1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACGUUUGG*CCAUCGU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F9S|1|S1|A|817
9F9S|1|S1|C|818
9F9S|1|S1|G|819
9F9S|1|S1|U|820
9F9S|1|S1|U|821
9F9S|1|S1|U|822
9F9S|1|S1|G|823
9F9S|1|S1|G|824
*
9F9S|1|S1|C|848
9F9S|1|S1|C|849
9F9S|1|S1|A|850
9F9S|1|S1|U|851
9F9S|1|S1|C|852
9F9S|1|S1|G|853
9F9S|1|S1|U|854

Current chains

Chain S1

Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1)

Nearby chains

Chain LM

60S ribosomal protein L19-A

Chain Sh

40S ribosomal protein S7-A