IL_9F9S_438

3D structure

PDB id

9F9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast SDD1 Disome with Mbf1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUAAGGA*UUU

Length

10 nucleotides

Bulged bases

9F9S|1|S1|G|1228

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F9S|1|S1|A|1224
9F9S|1|S1|U|1225
9F9S|1|S1|A|1226
9F9S|1|S1|A|1227
9F9S|1|S1|G|1228
9F9S|1|S1|G|1229
9F9S|1|S1|A|1230
*
9F9S|1|S1|U|1257
9F9S|1|S1|U|1258
9F9S|1|S1|U|1259

Current chains

Chain S1

Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1)

Nearby chains

Chain SF

Ubiquitin

Chain Sk

40S ribosomal protein S10-A

Chain Sm

40S ribosomal protein S12