IL_9F9S_440

3D structure

PDB id

9F9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast SDD1 Disome with Mbf1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUG*CUUGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F9S|1|S1|A|1230
9F9S|1|S1|U|1231
9F9S|1|S1|U|1232
9F9S|1|S1|G|1233
*
9F9S|1|S1|C|1252
9F9S|1|S1|U|1253
9F9S|1|S1|U|1254
9F9S|1|S1|G|1255
9F9S|1|S1|A|1256
9F9S|1|S1|U|1257

Current chains

Chain S1

Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1)

Nearby chains

Chain SD

Small ribosomal subunit protein uS14A

Chain SF

Ubiquitin

Chain Sk

40S ribosomal protein S10-A

Chain Sm

40S ribosomal protein S12