IL_9FIA_009
3D structure
- PDB id
- 9FIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU(body) structure derived from the SSU sample of the mitoribosome from T. gondii.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- UUGAUAGUACUACCGUAAGUACAUAAUAUACA*UAUAGAAGA
- Length
- 41 nucleotides
- Bulged bases
- 9FIA|1|bO|G|13, 9FIA|1|bO|U|14, 9FIA|1|bO|U|17, 9FIA|1|bO|G|21, 9FIA|1|bO|U|22, 9FIA|1|bO|A|23, 9FIA|1|bO|G|25, 9FIA|1|bO|U|35, 9FIA|1|bO|A|64, 9FIA|1|bO|A|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9FIA|1|bO|U|7
9FIA|1|bO|U|8
9FIA|1|bO|G|9
9FIA|1|bO|A|10
9FIA|1|bO|U|11
9FIA|1|bO|A|12
9FIA|1|bO|G|13
9FIA|1|bO|U|14
9FIA|1|bO|A|15
9FIA|1|bO|C|16
9FIA|1|bO|U|17
9FIA|1|bO|A|18
9FIA|1|bO|C|19
9FIA|1|bO|C|20
9FIA|1|bO|G|21
9FIA|1|bO|U|22
9FIA|1|bO|A|23
9FIA|1|bO|A|24
9FIA|1|bO|G|25
9FIA|1|bO|U|26
9FIA|1|bO|A|27
9FIA|1|bO|C|28
9FIA|1|bO|A|29
9FIA|1|bO|U|30
9FIA|1|bO|A|31
9FIA|1|bO|A|32
9FIA|1|bO|U|33
9FIA|1|bO|A|34
9FIA|1|bO|U|35
9FIA|1|bO|A|36
9FIA|1|bO|C|37
9FIA|1|bO|A|38
*
9FIA|1|bO|U|61
9FIA|1|bO|A|62
9FIA|1|bO|U|63
9FIA|1|bO|A|64
9FIA|1|bO|G|65
9FIA|1|bO|A|66
9FIA|1|bO|A|67
9FIA|1|bO|G|68
9FIA|1|bO|A|69
Current chains
- Chain bO
- SSUA
Nearby chains
- Chain BC
- Mitochondrial ribosomal protein, mS47
- Chain BF
- Mitochondrial ribosomal protein, mS147
- Chain BK
- Mitochondrial ribosomal protein, mS26
- Chain BQ
- Macro domain-containing protein
- Chain BV
- Putative homeodomain containing protein
- Chain Bl
- 30S ribosomal protein S12, putative
- Chain HJ
- 30S ribosomal protein S5, putative
- Chain b1
- ulr11
- Chain bK
- RNA5
- Chain bL
- RNA17
- Chain bV
- ulr20
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