9FIA Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9FIA_001 | 1/bE/49:65 | No text annotation | ||
| HL_9FIA_002 | 1/bK/5:13 | No text annotation | ||
| HL_9FIA_003 | 1/bO/46:51 | No text annotation | ||
| HL_9FIA_004 | 1/bT/30:35 | No text annotation | geometric HL_5NFV_001 HL_69752.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9FIA_001 | 1/b2/22:24, 1/bN/55:58 | Decoding loop related | geometric IL_2O3X_003 IL_31737.3 | |
| IL_9FIA_002 | 1/b2/26:28, 1/bN/52:53 | Single bulged A | geometric IL_8VTW_047 NA | |
| IL_9FIA_003 | 1/b2/38:40, 1/bT/9:11 | Isolated non-canonical cWW pair | geometric IL_8C3A_427 NA | |
| IL_9FIA_004 | 1/b2/40:43, 1/bT/5:9 | No text annotation | geometric IL_1J2B_001 IL_68909.1 | |
| IL_9FIA_005 | 1/bA/5:7, 1/bE/11:13 | Isolated non-canonical cWW pair | geometric IL_4YHW_002 IL_87907.2 | |
| IL_9FIA_012 | 1/bA/8:11, 1/bE/7:10 | No text annotation | ||
| IL_9FIA_007 | 1/bE/22:28, 1/bO/106:112 | No text annotation | ||
| IL_9FIA_008 | 1/bE/28:30, 1/bO/104:106 | Isolated non-canonical cWW pair | geometric IL_5TBW_027 NA | |
| IL_9FIA_009 | 1/bO/7:38, 1/bO/61:69 | No text annotation | ||
| IL_9FIA_010 | 1/bO/39:45, 1/bO/52:60 | No text annotation | ||
| IL_9FIA_011 | 1/bT/26:28, 1/bT/37:39 | Isolated non-canonical cWW pair | geometric IL_8C3A_045 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9FIA_006 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_9FIA_001 | 1/bE/30:49, 1/bE/65:87, 1/bN/3:6, 1/bO/96:104 | No text annotation |
Problematic loops
No problematic loops
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