IL_9FMD_001
3D structure
- PDB id
- 9FMD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Integrative model of the human post-catalytic spliceosome (P-complex)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUGUA*UUAUCC
- Length
- 11 nucleotides
- Bulged bases
- 9FMD|1|IN|A|144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9FMD|1|2|G|31
9FMD|1|2|U|32
9FMD|1|2|G|33
9FMD|1|2|U|34
9FMD|1|2|A|35
*
9FMD|1|IN|U|142
9FMD|1|IN|U|143
9FMD|1|IN|A|144
9FMD|1|IN|U|145
9FMD|1|IN|C|146
9FMD|1|IN|C|147
Current chains
- Chain 2
- U2 snRNA
- Chain IN
- INTRON
Nearby chains
- Chain 1
- PRKR-interacting protein 1
- Chain 6
- U6 spliceosomal RNA; U6 snRNA
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain F
- Splicing factor Cactin
- Chain W
- Pre-mRNA-processing factor 17
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