IL_9G1Z_054
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCUAGACAG*CCGAA
- Length
- 14 nucleotides
- Bulged bases
- 9G1Z|1|1|A|1217
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G1Z_054 not in the Motif Atlas
- Homologous match to IL_8CRE_057
- Geometric discrepancy: 0.2256
- The information below is about IL_8CRE_057
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9G1Z|1|1|U|1214
9G1Z|1|1|C|1215
9G1Z|1|1|U|1216
9G1Z|1|1|A|1217
9G1Z|1|1|G|1218
9G1Z|1|1|A|1219
9G1Z|1|1|C|1220
9G1Z|1|1|A|1221
9G1Z|1|1|G|1222
*
9G1Z|1|1|C|1279
9G1Z|1|1|C|1280
9G1Z|1|1|G|1281
9G1Z|1|1|A|1282
9G1Z|1|1|A|1283
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 0
- 60S ribosomal protein L20
- Chain AN
- Rpl40bp
Coloring options: