IL_9G1Z_091

3D structure

PDB id

9G1Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GC*GCAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9G1Z_091 not in the Motif Atlas

Geometric match to IL_8CRE_094

Geometric discrepancy: 0.0444

The information below is about IL_8CRE_094

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22551.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

9

Unit IDs

9G1Z|1|1|G|2254
9G1Z|1|1|C|2255
*
9G1Z|1|1|G|2285
9G1Z|1|1|C|2286
9G1Z|1|1|A|2287
9G1Z|1|1|U|2288

Current chains

Chain 1

25S rRNA

Nearby chains

Chain AO

60S ribosomal protein L41