IL_9G1Z_101
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUGA*UACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G1Z_101 not in the Motif Atlas
- Homologous match to IL_8CRE_109
- Geometric discrepancy: 0.1166
- The information below is about IL_8CRE_109
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
9G1Z|1|1|U|2690
9G1Z|1|1|U|2691
9G1Z|1|1|G|2692
9G1Z|1|1|A|2693
*
9G1Z|1|1|U|2707
9G1Z|1|1|A|2708
9G1Z|1|1|C|2709
9G1Z|1|1|A|2710
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 2
- Ribosomal 60S subunit protein L21A
- Chain AC
- 60S ribosomal protein L29
- Chain AP
- Ribosomal 60S subunit protein L42A
- Chain m
- Ribosomal 60S subunit protein L5
- Chain y
- Ribosomal 60S subunit protein L18A
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