IL_9G1Z_121
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 9G1Z|1|1|A|3102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G1Z_121 not in the Motif Atlas
- Homologous match to IL_8CRE_129
- Geometric discrepancy: 0.0793
- The information below is about IL_8CRE_129
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9G1Z|1|1|A|3075
9G1Z|1|1|U|3076
9G1Z|1|1|U|3077
9G1Z|1|1|A|3078
9G1Z|1|1|U|3079
*
9G1Z|1|1|A|3099
9G1Z|1|1|G|3100
9G1Z|1|1|A|3101
9G1Z|1|1|A|3102
9G1Z|1|1|U|3103
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AN
- Rpl40bp
- Chain q
- Ribosomal 60S subunit protein L9B
- Chain w
- Ribosomal 60S subunit protein L16A
Coloring options: