IL_9G1Z_175
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 9G1Z|1|A|A|577
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G1Z_175 not in the Motif Atlas
- Homologous match to IL_8CRE_423
- Geometric discrepancy: 0.0904
- The information below is about IL_8CRE_423
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52042.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9G1Z|1|A|G|560
9G1Z|1|A|U|561
9G1Z|1|A|G|562
9G1Z|1|A|C|563
9G1Z|1|A|C|564
9G1Z|1|A|A|565
9G1Z|1|A|G|566
*
9G1Z|1|A|C|573
9G1Z|1|A|G|574
9G1Z|1|A|G|575
9G1Z|1|A|U|576
9G1Z|1|A|A|577
9G1Z|1|A|A|578
9G1Z|1|A|U|579
9G1Z|1|A|U|580
9G1Z|1|A|C|581
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain E
- Ribosomal 40S subunit protein S3
- Chain Y
- Ribosomal 40S subunit protein S23B
- Chain f
- 40S ribosomal protein S30
Coloring options: