IL_9G1Z_189
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUGUCAG*CUUGGAUUUA
- Length
- 17 nucleotides
- Bulged bases
- 9G1Z|1|A|G|898
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G1Z_189 not in the Motif Atlas
- Homologous match to IL_8CRE_436
- Geometric discrepancy: 0.0757
- The information below is about IL_8CRE_436
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89047.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-cWH-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
9G1Z|1|A|U|878
9G1Z|1|A|U|879
9G1Z|1|A|G|880
9G1Z|1|A|U|881
9G1Z|1|A|C|882
9G1Z|1|A|A|883
9G1Z|1|A|G|884
*
9G1Z|1|A|C|895
9G1Z|1|A|U|896
9G1Z|1|A|U|897
9G1Z|1|A|G|898
9G1Z|1|A|G|899
9G1Z|1|A|A|900
9G1Z|1|A|U|901
9G1Z|1|A|U|902
9G1Z|1|A|U|903
9G1Z|1|A|A|904
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain C
- 40S ribosomal protein S1
- Chain P
- Small ribosomal subunit protein uS11
Coloring options: