IL_9G1Z_198
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 9G1Z|1|A|C|1143, 9G1Z|1|A|C|1144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G1Z_198 not in the Motif Atlas
- Homologous match to IL_8CRE_445
- Geometric discrepancy: 0.1108
- The information below is about IL_8CRE_445
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
9G1Z|1|A|A|1142
9G1Z|1|A|C|1143
9G1Z|1|A|C|1144
9G1Z|1|A|A|1145
*
9G1Z|1|A|U|1604
9G1Z|1|A|C|1605
9G1Z|1|A|C|1606
9G1Z|1|A|C|1607
9G1Z|1|A|U|1608
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain G
- Ribosomal 40S subunit protein S5
- Chain R
- Ribosomal 40S subunit protein S16A
- Chain d
- Ribosomal 40S subunit protein S28B
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