IL_9G1Z_210
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUACU*AGAG
- Length
- 9 nucleotides
- Bulged bases
- 9G1Z|1|A|U|1325
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G1Z_210 not in the Motif Atlas
- Homologous match to IL_8CRE_458
- Geometric discrepancy: 0.0959
- The information below is about IL_8CRE_458
- Detailed Annotation
- Non-canonical cWW with near cWH
- Broad Annotation
- Non-canonical cWW with near cWH
- Motif group
- IL_10994.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
9G1Z|1|A|C|1324
9G1Z|1|A|U|1325
9G1Z|1|A|A|1326
9G1Z|1|A|C|1327
9G1Z|1|A|U|1328
*
9G1Z|1|A|A|1368
9G1Z|1|A|G|1369
9G1Z|1|A|A|1370
9G1Z|1|A|G|1371
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain R
- Ribosomal 40S subunit protein S16A
- Chain S
- Ribosomal 40S subunit protein S17B
- Chain V
- Ribosomal 40S subunit protein S20
- Chain h
- Guanine nucleotide-binding protein subunit beta-like protein
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