IL_9G33_036
3D structure
- PDB id
- 9G33 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stalled 90S - Utp23-Krr1-deltaC3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GUAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 9G33|1|D3|U|170
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G33_036 not in the Motif Atlas
- Geometric match to IL_8P9A_383
- Geometric discrepancy: 0.1714
- The information below is about IL_8P9A_383
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24485.1
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 4
Unit IDs
9G33|1|D3|G|143
9G33|1|D3|U|144
9G33|1|D3|A|145
9G33|1|D3|U|146
9G33|1|D3|A|147
9G33|1|D3|A|148
9G33|1|D3|C|149
*
9G33|1|D3|G|165
9G33|1|D3|C|166
9G33|1|D3|U|167
9G33|1|D3|A|168
9G33|1|D3|A|169
9G33|1|D3|U|170
9G33|1|D3|A|171
9G33|1|D3|C|172
Current chains
- Chain D3
- 18S rRNA
Nearby chains
- Chain DG
- 40S ribosomal protein S6-A
- Chain JC
- Ribosome biogenesis protein ENP2
- Chain UT
- U3 small nucleolar RNA-associated protein 20
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