IL_9G5B_021
3D structure
- PDB id
- 9G5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit (State A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AAACU*ACUAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G5B_021 not in the Motif Atlas
- Homologous match to IL_6CZR_145
- Geometric discrepancy: 0.2058
- The information below is about IL_6CZR_145
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9G5B|1|A|A|1067
9G5B|1|A|A|1068
9G5B|1|A|A|1069
9G5B|1|A|C|1070
9G5B|1|A|U|1071
*
9G5B|1|A|A|1087
9G5B|1|A|C|1088
9G5B|1|A|U|1089
9G5B|1|A|A|1090
9G5B|1|A|U|1091
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain I
- 28S ribosomal protein S11, mitochondrial
- Chain Q
- 28S ribosomal protein S21, mitochondrial
- Chain c
- Dimethyladenosine transferase 1, mitochondrial
Coloring options: