IL_9G5B_030
3D structure
- PDB id
- 9G5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit (State A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CG*UCAAG
- Length
- 7 nucleotides
- Bulged bases
- 9G5B|1|A|C|1330, 9G5B|1|A|A|1331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G5B_030 not in the Motif Atlas
- Homologous match to IL_5J7L_048
- Geometric discrepancy: 0.2239
- The information below is about IL_5J7L_048
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
9G5B|1|A|C|1262
9G5B|1|A|G|1263
*
9G5B|1|A|U|1329
9G5B|1|A|C|1330
9G5B|1|A|A|1331
9G5B|1|A|A|1332
9G5B|1|A|G|1333
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain C
- 28S ribosomal protein S24, mitochondrial
- Chain D
- 28S ribosomal protein S5, mitochondrial
- Chain H
- 28S ribosomal protein S10, mitochondrial
- Chain K
- 28S ribosomal protein S14, mitochondrial
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