IL_9G6J_011
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UG*UGUGUA
- Length
- 8 nucleotides
- Bulged bases
- 9G6J|1|1|G|249, 9G6J|1|1|U|250, 9G6J|1|1|U|252
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_011 not in the Motif Atlas
- Homologous match to IL_8CRE_010
- Geometric discrepancy: 0.2535
- The information below is about IL_8CRE_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70376.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
9G6J|1|1|U|168
9G6J|1|1|G|169
*
9G6J|1|1|U|248
9G6J|1|1|G|249
9G6J|1|1|U|250
9G6J|1|1|G|251
9G6J|1|1|U|252
9G6J|1|1|A|253
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AI
- Ribosomal 60S subunit protein L35A
- Chain p
- 60S ribosomal protein L8
- Chain t
- 60S ribosomal protein L13
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