IL_9G6J_039
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- CGUAUC*GAAG
- Length
- 10 nucleotides
- Bulged bases
- 9G6J|1|1|A|1099
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_039 not in the Motif Atlas
- Homologous match to IL_8CRE_039
- Geometric discrepancy: 0.1803
- The information below is about IL_8CRE_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34737.1
- Basepair signature
- cWW-L-cHW-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
9G6J|1|1|C|973
9G6J|1|1|G|974
9G6J|1|1|U|975
9G6J|1|1|A|976
9G6J|1|1|U|977
9G6J|1|1|C|978
*
9G6J|1|1|G|1097
9G6J|1|1|A|1098
9G6J|1|1|A|1099
9G6J|1|1|G|1100
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AC
- 60S ribosomal protein L29
- Chain o
- Ribosomal 60S subunit protein L7A
- Chain y
- Ribosomal 60S subunit protein L18A
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