IL_9G6J_081
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 9G6J|1|1|U|1927
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_081 not in the Motif Atlas
- Homologous match to IL_8CRE_084
- Geometric discrepancy: 0.0519
- The information below is about IL_8CRE_084
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47346.2
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
9G6J|1|1|C|1914
9G6J|1|1|G|1915
9G6J|1|1|U|1916
9G6J|1|1|A|1917
9G6J|1|1|A|1918
9G6J|1|1|C|1919
*
9G6J|1|1|G|1924
9G6J|1|1|G|1925
9G6J|1|1|A|1926
9G6J|1|1|U|1927
9G6J|1|1|A|1928
9G6J|1|1|A|1929
9G6J|1|1|G|1930
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain AO
- Small ribosomal subunit protein eS32
- Chain AQ
- Ribosomal 60S subunit protein L43A
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