IL_9G6J_105
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GUG*UUUUU
- Length
- 8 nucleotides
- Bulged bases
- 9G6J|1|1|U|2832
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_105 not in the Motif Atlas
- Homologous match to IL_8CRE_113
- Geometric discrepancy: 0.1535
- The information below is about IL_8CRE_113
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51387.2
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 20
Unit IDs
9G6J|1|1|G|2800
9G6J|1|1|U|2801
9G6J|1|1|G|2802
*
9G6J|1|1|U|2830
9G6J|1|1|U|2831
9G6J|1|1|U|2832
9G6J|1|1|U|2833
9G6J|1|1|U|2834
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AT
- Transfer RNA; tRNA
- Chain k
- 60S ribosomal protein L3
- Chain r
- Ribosomal 60S subunit protein L10
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