IL_9G6J_154
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UUAUUU*AUUCA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_154 not in the Motif Atlas
- Homologous match to IL_8CRE_399
- Geometric discrepancy: 0.0796
- The information below is about IL_8CRE_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31545.1
- Basepair signature
- cWW-L-R-L-cWW-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
9G6J|1|A|U|117
9G6J|1|A|U|118
9G6J|1|A|A|119
9G6J|1|A|U|120
9G6J|1|A|U|121
9G6J|1|A|U|122
*
9G6J|1|A|A|293
9G6J|1|A|U|294
9G6J|1|A|U|295
9G6J|1|A|C|296
9G6J|1|A|A|297
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain F
- 40S ribosomal protein S4
- Chain J
- 40S ribosomal protein S8
Coloring options: