IL_9G6J_176
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GUUAAAA*UC
- Length
- 9 nucleotides
- Bulged bases
- 9G6J|1|A|A|617
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_176 not in the Motif Atlas
- Homologous match to IL_8CRE_424
- Geometric discrepancy: 0.0638
- The information below is about IL_8CRE_424
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
9G6J|1|A|G|614
9G6J|1|A|U|615
9G6J|1|A|U|616
9G6J|1|A|A|617
9G6J|1|A|A|618
9G6J|1|A|A|619
9G6J|1|A|A|620
*
9G6J|1|A|U|1089
9G6J|1|A|C|1090
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain Y
- Ribosomal 40S subunit protein S23B
- Chain b
- 40S ribosomal protein S26
Coloring options: