IL_9G6J_182

3D structure

PDB id

9G6J (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

AAAAAUU*AUAU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9G6J|1|A|A|738
9G6J|1|A|A|739
9G6J|1|A|A|740
9G6J|1|A|A|741
9G6J|1|A|A|742
9G6J|1|A|U|743
9G6J|1|A|U|744
*
9G6J|1|A|A|775
9G6J|1|A|U|776
9G6J|1|A|A|777
9G6J|1|A|U|778

Current chains

Chain A

18S rRNA

Nearby chains

Chain F

40S ribosomal protein S4

Chain K

Ribosomal 40S subunit protein S9B

Chain X

40S ribosomal protein S22-A